| Package | Description |
|---|---|
| jebl.evolution.align.scores | |
| jebl.evolution.substmodel |
| Class | Description |
|---|---|
| RateMatrix |
abstract base class for all rate matrices
|
| Class | Description |
|---|---|
| AbstractRateMatrix |
abstract base class for all rate matrices
|
| AminoAcidModel |
base class of rate matrices for amino acids
|
| RateMatrix |
abstract base class for all rate matrices
|
http://code.google.com/p/jebl2/