Uses of Class
org.snpsift.fileIterator.DbNsfpEntry

Packages that use DbNsfpEntry

Package	Description
org.snpsift
org.snpsift.fileIterator

Uses of DbNsfpEntry in org.snpsift

Fields in org.snpsift declared as DbNsfpEntry

Modifier and Type	Field	Description
protected DbNsfpEntry	SnpSiftCmdDbNsfp.currentDbEntry

Uses of DbNsfpEntry in org.snpsift.fileIterator

Fields in org.snpsift.fileIterator with type parameters of type DbNsfpEntry

Modifier and Type	Field	Description
protected java.util.List<DbNsfpEntry>	DbNsfp.latestResults

Methods in org.snpsift.fileIterator that return DbNsfpEntry

Modifier and Type	Method	Description
DbNsfpEntry	DbNsfpEntry.cloneShallow()

Methods in org.snpsift.fileIterator that return types with arguments of type DbNsfpEntry

Modifier and Type	Method	Description
java.util.Collection<DbNsfpEntry>	DbNsfp.query(org.snpeff.interval.Variant variant)	Query tabix file to get dbNsfp entries (or cached entries from latest results)

Methods in org.snpsift.fileIterator with parameters of type DbNsfpEntry

Modifier and Type	Method	Description
protected boolean	DbNsfp.match(org.snpeff.interval.Variant var, DbNsfpEntry dbEntry)	Does database entry 'DbNsfpEntry' match 'variant'?