Uses of Class
org.snpsift.lang.function.Function

Packages that use Function

Package	Description
org.snpsift.lang
org.snpsift.lang.function

Uses of Function in org.snpsift.lang

Methods in org.snpsift.lang that return Function

Modifier and Type	Method	Description
Function	LangFactory.expressionSetFactory(org.antlr.v4.runtime.tree.ParseTree tree)	Create FunctionBoolSet from AST
Function	LangFactory.functionFactory(org.antlr.v4.runtime.tree.ParseTree tree)	Create function
Function	LangFactory.functionVcfEntryFactory(org.antlr.v4.runtime.tree.ParseTree tree)	Create Functions from tree Note: These functions that are calculated on the whole VcfEntry.

Uses of Function in org.snpsift.lang.function

Subclasses of Function in org.snpsift.lang.function

Modifier and Type	Class	Description
class	CountHet	Count number of heterozygous samples
class	CountHom	Count number of homozygous samples
class	CountRef	Count number of refernces samples
class	CountVariant	Count number of ALT samples
class	FunctionBoolGenotype	A function that returns a bool type (i.e.
class	In	Is an expression in a set?
class	IsHet	Is 'genotypeNum' heterozygous?
class	IsHom	Is 'genotypeNum' homozygous?
class	IsRef	Is 'genotypeNum' reference?
class	IsVariant	Is 'genotypeNum' reference?